SNOW SHRINE is discontinued
UW will not join the GPC in the new contract with PCRF (PCORnet 2.0). Because of that decision, we will discontinue being the SNOW hub. -- SNOW Sep 25
Earlier Work
status: rough but useful; see #680 for updates
Site | Demographics | Diagnoses | Procedures | Tumor Registry |
---|---|---|---|---|
The University of Kansas Medical Center (KUMC) | OK | OK: #567 | OK | OK |
Regenstrief (IU) | OK | OK: #575 | ||
University of Iowa Healthcare (UIOWA) | #588 | |||
The University of Wisconsin-Madison (WISC) | #681 | |||
The Medical College of Wisconsin (MCW) | OK | OK* | OK | OK |
Marshfield Clinic (Wisconsin) (MCRF) | OK | OK | ||
The University of Minnesota Academic Health Center (UMN) | OK | OK | OK | |
The University of Missouri (MU) | #600 | |||
The University of Nebraska Medical Center (UNMC) | OK | OK* | ||
The University of Texas Health Sciences Center at San Antonio (UTHSCSA) | OK | OK | OK | ETA end of Feb / March |
The University of Texas Southwestern Medical Center (UTSW) | OK | OK | OK | OK |
*Postgres nodes (UNMC, MCW) sometimes time out (#676); work-around: run it again while the cache is warm
ref:
- SNOW SHRINE status: IU, MCRF, UMN, KUMC, UTSW ok with Dem + DX Dan Connolly Jan 16
- TODO: find procedures status update
- TODO: find tumor registry status update
Ontologies: Demographics and Diagnoses
- shrine-ontology - Revision 3570: /PCORI/releases/PCORI Ontology 2.1
- SNOW Shrine Ontologies
Phillip Reeder Thu Mar 9 08:39:45 CST 2017 - #525 closed Sep 5, 2017 including one test case:
- SNOW Shrine Ontologies
<item> <item_name>Asian</item_name> <item_key>\\SHRINE\SHRINE\DEMOGRAPHIC\RACE\02\</item_key> </item> <item> <item_name>Malignant neoplasm of female breast</item_name> <item_key>\\SHRINE\SHRINE\DIAGNOSIS\09\(001-999.99) D~qlur\(140-239.99) N~6vc5\(170-176.99) M~9a4g\(174) Malignan~cb7r\</item_key> </item>
Ontologies: NAACCR Tumor Registry
See attachments to NAACCR_ETL Sep 27, 2017:
shrine_ont.naaccr_ontology.zip
AdapterMappings_naaccr_1to1.zip
This is work in progress:
schils-ontology: DVCS clone of SVN repo
I couldn't figure out git-svn, but hg convert worked on the 1st try, so...
https://bitbucket.org/gpcnetwork/shrine-ontology-clone
$ hg convert https://open.med.harvard.edu/svn/shrine-ontology/PCORI/trunk so-hg $ cd so-hg $ hg log --template ' {rev}. {node|short} {date|shortdate} {desc|firstline|strip}\n' | sort -n
- bab2fdccf1d6 2015-06-04 Organizig new repo per conversation with Philip, part 2: move existing subprojects into their own top-level directories
- d632bc0ccd01 2015-06-15
- e9b9c63f2348 2015-06-15
...
- badc1f4f4489 2015-09-28 Added version 202 test files and mappings for encounters, vitals, diagnoses and labs
- 2dc4f6b7d15d 2015-09-28 added corrected meds oracle file with dates formated
...
- fb7d0d580d61 2017-09-06
- 5d708c60cef7 2018-02-07
- 12dce4078d49 2018-02-07
- c4803c9ab3c8 2018-02-07
TODO: figure out how SVN version numbers relate to these hg hashes
ideas
- a nicer page in www.gpcnetwork.org with the snowy cow and such...
- PROVIDE-HF query. DROC request #32. Query is on babel: Shared\PROVIDE-HF
- OK / temp problem / in progress; ETA XXX / not planned status.
- gross patient counts: replace OK with 500K
- active monitoring: #680
- meanwhile, low tech:
- UMN Shrine Down Andrew Hangsleben Wed Jan 31
- meanwhile, low tech:
Last modified 2 years ago
Last modified on Feb 18, 2019 11:09:40 AM